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Publications

A full list of publications and presentations can be found at in Dr. Aplerin's full . 

Fleerackers, A., Shores, K., Chtena, N., & Alperin, J. P. (2023). Unreviewed science in the news: The evolution of preprint media coverage from 2014-2021. bioRxiv. 

Fleerackers, A., Chtena, N., Oliveira, M., Dorsch, I., Pinfield, S., & Alperin, J. P. (2023). Open data journalism: A narrative synthesis of how, when, and why data journalists use open data sources. SocArXiv. 

Fleerackers, A., Chtena, N., Pinfield, S., Alperin, J. P., Barata, G., Oliveira, M., & Peters, I. (2023). Making science public: a review of journalists use of Open Science research [version 1; peer review: awaiting peer review]. F1000Research

Alperin, J. P., Fleerackers, A., Riedlinger, M., & Haustein, S. (2023). Second-order citations in altmetrics: a case study analyzing the audiences of COVID-19 research in the news and on social media. bioRxiv. 

Atef, N., Fleerackers, A., & Alperin, J. P. (2023). Influencers or doctors? Physicians presentation of self in Youtube and Facebook videos. International Journal of Communication17(0), 24. 

Cobey, K. D., Haustein, S., Brehaut, J., Dirnagl, U., Franzen, D. L., Hemkens, L. G., Presseau, J., Riedel, N., Strech, D., Alperin, J. P., Costas, R., Sena, E. S., van Leeuwen, T., Ardern, C. L., Bacellar, I. O. L., Camack, N., Britto Correa, M., Buccione, R., Cenci, M. S., Moher, D. (2023). Community consensus on core open science practices to monitor in biomedicine. PLOS Biology21(1), e3001949. 

Khanna, S., Ball, J., Alperin, J. P., & Willinsky, J. (2022). Recalibrating the scope of scholarly publishing: A modest step in a vast decolonization process. Quantitative Science Studies3(4), 912930. 

Fleerackers, A., Moorhead, L. L., Maggio, L. A., Fagan, K., & Alperin, J. P. (2022). Science in motion: A qualitative analysis of journalists use and perception of preprints. PLOS ONE17(11), e0277769. 

Alperin, J. P. (2022). Why I think ending article-processing charges will save open access. Nature610(7931), 233233. 

Khanna, S., Ball, J., Alperin, J. P., & Willinsky, J. (2022). Recalibrating the scope of scholarly publishing: a modest step in a vast decolonization process. SciELO Preprints. https://doi.org/10.1590/SciELOPreprints.4729

Fleerackers, A., Nehring, L., Maggio, L. A., Enkhbayar, A., Moorhead, L., & Alperin, J. P. (2022). Identifying science in the news: An assessment of the precision and recall of Altmetric.com news mention data. Scientometrics

Haustein, S., Cobey, K., Neylon, C., Riedel, N., Franzen, D., Alperin, J. P., Dirnagl, U., & Moher, D. (2022, September 7). User-centred design in indicator development: Involving the biomedical community in building an open science dashboard. Proceedings of the 26th International Conference on Science and Technology Indicators. International Conference on Science and Technology Indicators, Granada, Spain. 

Cobey, K. D., Haustein, S., Brehaut, J., Dirnagl, U., Franzen, D. L., Hemkens, L. G., Presseau, J., Riedel, N., Strech, D., Alperin, J. P., Costas, R., Sena, E. S., van Leeuwen, T., Ardern, C. L., Bacellar, I. O. L., Camack, N., Correa, M. B., Buccione, R., Cenci, M. S., Moher, D. (2022). Establishing a core set of open science practices in biomedicine: a modified Delphi study[Preprint]. Health Policy. 

Atef, N., Fleerackers, A., & Alperin, J. P. (2022). Doctors on YouTube: Exploring the Uses and Gratifications of Health Vloggers. SocArXiv. 

Dawson, D. (DeDe), Morales, E., McKiernan, E. C., Schimanski, L. A., Niles, M. T., & Alperin, J. P. (2022). The role of collegiality in academic review, promotion, and tenure. PLOS ONE17(4), e0265506. 

Morales, E., Kalir, J. H., Fleerackers, A., & Alperin, J. P. (2022). Using social annotation to construct knowledge with others: A case study across undergraduate courses. F1000Research

Fleerackers, A., Moorhead, L., Maggio, L. A., Fagan, K., & Alperin, J. P. (2022). Science in motion: A qualitative analysis of journalists use and perception of preprints. bioRxiv. 

Reilly, K. M. A., & Alperin, J. P. (2021). A stewardship approach to theorizing open data for development. In Open Data for Development. The MIT Press. 

Morales, E., McKiernan, E. C., Niles, M. T., Schimanski, L., & Alperin, J. P. (2021). How faculty define quality, prestige, and impact of academic journals. PLOS ONE16(10), e0257340. 

Maliki, M., Costello, J., Alperin, J. P., & Maggio, L. A. (2021). Analysis of single comments left for bioRxiv preprints till September 2019. Biochemia Medica31(2), 00. 

Rozemblum, C., Alperin, J. P., & Unzurrunzaga, C. (2021). Las limitaciones de Scopus como fuente de indicadores: Buscando una visibilidad integral para revistas argentinas en ciencias sociales. e-Ciencias de la Informaci籀n11(2). 

Fleerackers, A., Riedlinger, M., Moorhead, L., Ahmed, R., & Alperin, J. P. (2021). Communicating scientific uncertainty in an age of COVID-19: an investigation into the use of preprints by digital media outlets. Health Communication, 113. 

Matthias, L., Fleerackers, A., & Alperin, J. P. (2020). Framing science: How opioid research is presented in online news media. Frontiers in Communication5(64). 

Alperin, J. P., La, M., McKiernan, E. C., Niles, M. T., & Schimanski, L. A. (2020). The value of data and other non-traditional scholarly outputs in academic review, promotion, and tenure in Canada and the United States. Open Handbook of Linguistic Data Management

Fleerackers, A., Riedlinger, M., Moorhead, L., Ahmed, R., & Alperin, J. P. (2020). Replication Data for: Communicating scientific uncertainty in an age of COVID-19. Harvard Dataverse. 

Rozemblum, C., Alperin, J. P., & Unzurrunzaga, C. (2020). Las limitaciones de Scopus como fuente de indicadores: Buscando una visibilidad integral para revistas argentinas en ciencias sociales. Zenodo. https://doi.org/10.5281/zenodo.4110847

Maliki, M., Costello, J., Alperin, J. P., & Maggio, L. A. (2020). From amazing work to I beg to differ - analysis of bioRxiv preprints that received one public comment till September 2019. BioRxiv, 2020.10.14.340083. 

Enkhbayar, A., Haustein, S., Barata, G., & Alperin, J. P. (2020). How much research shared on Facebook happens outside of public pages and groups? A comparison of public and private online activity around PLOS ONE papers. Quantitative Science Studies1(2), 749770. 

Moscrop, D., Wong, L., & Alperin, J. P. (2020). Have you seen this? Why political pundits share scholarly research on social media. Scholarly and Research Communication11(1), 21. 

Kalir, J. H., Morales, E., Fleerackers, A., & Alperin, J. P. (2020). When I saw my peers annotating: Student perceptions of social annotation for learning in multiple courses. Information and Learning Sciencesahead-of-print(ahead-of-print). 

Niles, M. T., Schimanski, L. A., McKiernan, E. C., & Alperin, J. P. (2020). Why we publish where we do: Faculty publishing values and their relationship to review, promotion and tenure expectations. PLOS ONE15(3), e0228914. 

Costas, R., Zahedi, Z., & Alperin, J. P. (2019). Global country-level patterns of Mendeley readership performance compared to citation performance: Does Mendeley provide a different picture on the impact of scientific publications across countries? ISSI Conference, Rome, Italy.

Alperin, J. P., Gomez, C. J., & Haustein, S. (2019). Identifying diffusion patterns of research articles on Twitter: A case study of online engagement with open access articles. Public Understanding of Science28(1), 218. 

McKiernan, E. C., Schimanski, L. A., Mu簽oz Nieves, C., Matthias, L., Niles, M. T., & Alperin, J. P. (2019). Use of the Journal Impact Factor in academic review, promotion, and tenure evaluations. ELife8, e47338. 

Alperin, J. P. (2019, May 27). Connecting open education to democratic ideals. Open Education 2019, Vancouver, Canada. 

Alperin, J. P. (2019, May 22). Online annotations in the classroom: How, why, and  what do students learn from annotating course material? iAnnotate, Washington DC, USA.

Alperin, J. P., Mu簽oz Nieves, C., Schimanski, L. A., Fischman, G. E., Niles, M. T., & McKiernan, E. C. (2019). How significant are the public dimensions of faculty work in review, promotion and tenure documents? ELife8, e42254. 

Maggio, L. A., Ratcliff, C. L., Krakow, M., Moorhead, L. L., Enkhbayar, A., & Alperin, J. P. (2019). Making headlines: An analysis of US government-funded cancer research mentioned in online media. BMJ Open9(2), e025783. 

Shu, F., Mongeon, P., Haustein, S., Siler, K., Alperin, J. P., & Larivi癡re, V. (2018). Is it such a big deal? On the cost of journal use in the digital era. College & Research Libraries79(6), 785798. 

Didegah, F., Ghaseminik, Z., & Alperin, J. P. (2018). Using a diabetes discussion forum and Wikipedia to detect the alignment of public interests and the research literature. BioRxiv

Schimanski, L. A., & Alperin, J. P. (2018). The evaluation of scholarship in academic promotion and tenure processes: Past, present, and future. F1000Research7, 1605. 

Enkhbayar, A., & Alperin, J. P. (2018). Challenges of capturing engagement on Facebook for Altmetrics. STI 2018 Conference Proceedings, 14601469. 

Barata, G., Araujo, R. F., Alperin, J. P., & Rodr穩guez, C. T. (2018). O uso de m穩dias sociais por acad礙micos Brasileiros. Encontro Brasileiro de Bibliometria e Cientometria, 209217. 

Alperin, J. P., Willinsky, J., Owen, B., Macgregor, J., Smecher, A., & Stranack, K. (2018). The Public Knowledge Project: Reflections and directions after its first two decades. ELectronic PUBlishingConnecting the Knowledge Commons: From Projects to Sustainable Infrastructure

Alperin, J. P., Mu簽oz Nieves, C., Schimanski, L., McKiernan, E. C., & Niles, M. T. (2018). Terms and concepts found in tenure and promotion guidelines from the US and Canada

Siler, K., Haustein, S., Smith, E., Larivi癡re, V., & Alperin, J. P. (2018). Authorial and institutional stratification in open access publishing: the case of global health research. PeerJ6, e4269. 

Piwowar, H., Priem, J., Larivi癡re, V., Alperin, J. P., Matthias, L., Norlander, B., Farley, A., West, J., & Haustein, S. (2018). The state of OA: a large-scale analysis of the prevalence and impact of Open Access articles. PeerJ6, e4375. 

Barata, G., Shores, K., & Alperin, J. P. (2018). Local chatter or international buzz? Language differences on posts about Zika research on Twitter and Facebook. PLOS ONE13(1), e0190482. 

Garnett, A., Aufreiter, M., Buchtala, O., & Alperin, J. P. (2017). Introducing Texture: An open source WYSIWYG Javascript editor for JATS. National Center for Biotechnology Information (US). 

Alperin, J. P., Hanson, E. W., Shores, K., & Haustein, S. (2017). Twitter bot surveys: a discrete choice experiment to increase response rates. Proceedings of the 8th International Conference on Social Media & Society, 14. 

Alperin, J. P., & Rozemblum, C. (2017). La reinterpretaci籀n de visibilidad y calidad en las nuevas pol穩ticas de evaluaci籀n de revistas cient穩ficas. Revista Interamericana de Bibliotecolog穩a40(3), 231241. 

Reilly, K. M. A., & Alperin, J. P. (2016). Intermediation in open development: A knowledge stewardship approach. Global Media Journal - Canadian EditionVolume 9(1), 5171. 

Alperin, J. P., Stranack, K., & Garnett, A. (2016). On the peripheries of scholarly infrastructure: A look at the journals using Open Journal Systems. Proceedings of the 21st International Conference on Science and Technology Indicators. 21st International Conference on Science and Technology Indicators, Valencia, Spain. 

Neto, S. C., Willinsky, J., & Alperin, J. P. (2016). Measuring, rating, supporting, and strengthening open access scholarly publishing in Brazil. Education Policy Analysis Archives24(0), 54. 

Alperin, J. P., & Fischman, Gustavo E. (Eds.). (2015). Made in Latin America: Open access, scholarly journals, and regional innovations