¶¡ÏãÔ°AV

An introduction to the biochemical and physiological mechanisms of living organisms. Topics covered include cell structure and function, DNA replication and the flow of genetic information, enzyme function, metabolism and physiology of microorganisms, plants, and animals. Prerequisite: High school biology 12 (or equivalent) with a C grade or better, or BISC 100 with C- or better, or BISC 113 with C- or better, or HSCI 100 with C+ or better. Breadth-Science.

Survey of the diversity of life, and its evolutionary history on earth. The student is introduced to the study of genetics, development, and evolution, giving an overview of how these processes interact to produce form and function. Also included are principles of behavior and ecological relationships of organisms to each other and their environment. Prerequisite: High school biology 12 (or equivalent) with a C grade or better, or BISC 100 with C- or better, or BISC 113 with C- or better, or HSCI 100 with C+ or better. Breadth-Science.

Principles and concepts of the transmission of genetic information treated comparatively in man, animal, plant and microbe. Prerequisite: BISC 101 and 102 with a grade of C- or better.

Atomic and molecular structure; chemical bonding; thermochemistry; elements; periodic table; gases liquids, solids, and solutions. This course includes a laboratory component. Prerequisite: BC high school chemistry 12 or CHEM 111. Recommended: MATH 151 (or 154) and PHYS 120 (or 101) as a corequisite. Students may not count both CHEM 120 and 121 for credit. Quantitative/Breadth-Science.

Chemical equilibria; electrochemistry; chemical thermodynamics; kinetics. Students who intend to take further laboratory courses in chemistry should take CHEM 122 concurrently with CHEM 126. Prerequisite: CHEM 121 or 120. Recommended: MATH 152 (or 155) and PHYS 121 (or 102) as a corequisite. Quantitative.

Experiments in chemical equilibrium, acids and bases, qualitative analysis, electrochemistry and chemical kinetics. Prerequisite: CHEM 121. Corequisite: CHEM 122. Quantitative.

Structure, bonding, physical and chemical properties of simple organic compounds. Introduction to spectroscopy. Kinetics and mechanisms of organic reactions. This course includes a laboratory component. Prerequisite: CHEM 121. Corequisite: CHEM 122. Quantitative.

Laboratory work chosen to complement CHEM 282. Prerequisite: CHEM 281. Corequisite: CHEM 282 or 283. Quantitative.

The structure, function and synthesis of proteins, RNA and DNA and their interrelated biological functions within the cell. An introduction to molecular biology techniques and methods of protein purification and analysis. Prerequisite: or Corequisite CHEM 281.

A study of the molecular processes which underlie cell structure and function, integrating ultrastructural, physiological and biochemical approaches. Modern techniques used in the analysis of organelle and cell function are integral parts of the course. Prerequisite: MBB 222, BISC 101, CHEM 281 with grades of C- or better. Corequisite or Prerequisite: CHEM 282 or CHEM 283.

The principles of analytical chemistry and their practical application to solution samples. Titrimetric and electrochemical methods. Prerequisite: CHEM 122 and 126. Quantitative.

Polyfunctional organic compounds and complex organic reactions. Introduction to natural products. Students with credit for CHEM 283 may not complete this course for further credit. Prerequisite: CHEM 281. Quantitative.

An advanced treatment of Organic Chemistry II. Topics include dienes and their reactivity, conjugation and aromaticity, aromatic substitution reactions, carboxylic acids and their derivatives, ketones and aldehydes, biological molecules, radical reactions, organometallic reagents, pericyclic reactions and planning multi-step synthesis. Prerequisite: CHEM 281. Students should not receive credit for both CHEM 282 and 283. Students should not receive credit for both CHEM 282 and 283. Quantitative.

Basic principles of infrared, ultraviolet, nuclear magnetic resonance and mass spectroscopy as applied to the identification of organic compounds. Prerequisite: CHEM 283 and 286, or permission of the department.

A programming course which will provide the science student with a working knowledge of a scientific programming language and an introduction to computing concepts, structured programming, and modular design. The student will also gain knowledge in the use of programming environments including the use of numerical algorithm packages. Corequisite: MATH 152 or 155 (or 158). Students with credit for CMPT 120, 125, 126, 130, 135, or 128 may not take CMPT 102 for further credit. Quantitative.

Topics will include user interfaces, objects, event-driven programming, program design, and file and data management. Prerequisite: BC mathematics 12 (or equivalent) or any 100 level MATH course. Students with credit for, or are currently enrolled in a computing science course at the 200 level or higher, or ITEC 240, 241 or 242 may not take this course for further credit. Quantitative.

An elementary introduction to computing science and computer programming, suitable for students with little or no programming background. Students will learn fundamental concepts and terminology of computing science, acquire elementary skills for programming in a high-level language and be exposed to diverse fields within, and applications of computing science. Topics will include: pseudocode, data types and control structures, fundamental algorithms, computability and complexity, computer architecture, and history of computing science. Treatment is informal and programming is presented as a problem-solving tool. Prerequisite: BC Math 12 or equivalent is recommended. Students with credit for CMPT 102, 125, 126, 128 or 130 may not take this course for further credit. Quantitative/Breadth-Science.

A rigorous introduction to computing science and computer programming, suitable for students who already have substantial programming background. Topics include: fundamental algorithms and problem solving; abstract data types and elementary data structures; basic object-oriented programming and software design; elements of empirical and theoretical algorithmics; computation and computability; specification and program correctness; and history of computing science. Prerequisite: CMPT 120: Introduction to Computing Science and Programming I. Students with credit for CMPT 125, 128, 130, 135 or higher may not take CMPT 126 for further credit. Quantitative/Breadth-Science.

An introduction to computing science and computer programming, using a systems oriented language, such as C or C++. This course introduces basic computing science concepts. Topics will include: elementary data types, control structures, functions, arrays and strings, fundamental algorithms, computer organization and memory management. Prerequisite: BC Math 12 (or equivalent, or any of MATH 100, 150, 151, 154, or 157). Students with credit for CMPT 102, 120, 126, or 128 may not take this course for further credit. Quantitative/Breadth-Science.

Designed for students specializing in mathematics, physics, chemistry, computing science and engineering. Topics as for Math 151 with a more extensive review of functions, their properties and their graphs. Recommended for students with no previous knowledge of Calculus. In addition to regularly scheduled lectures, students enrolled in this course are encouraged to come for assistance to the Calculus Workshop (Burnaby), or Math Open Lab (Surrey). Prerequisite: Pre-Calculus 12 (or equivalent) with a grade of at least B+, or MATH 100 with a grade of at least B-, or achieving a satisfactory grade on the ¶¡ÏãÔ°AV Calculus Readiness Test. Students with credit for either MATH 151, 154 or 157 may not take MATH 150 for further credit. Quantitative.

Designed for students specializing in mathematics, physics, chemistry, computing science and engineering. Logarithmic and exponential functions, trigonometric functions, inverse functions. Limits, continuity, and derivatives. Techniques of differentiation, including logarithmic and implicit differentiation. The Mean Value Theorem. Applications of differentiation including extrema, curve sketching, Newton's method. Introduction to modeling with differential equations. Polar coordinates, parametric curves. Prerequisite: Pre-Calculus 12 (or equivalent) with a grade of at least A, or MATH 100 with a grade of at least B, or achieving a satisfactory grade on the ¶¡ÏãÔ°AV Calculus Readiness Test. Students with credit for either MATH 150, 154 or 157 may not take MATH 151 for further credit. Quantitative.

Designed for students specializing in the biological and medical sciences. Topics include: limits, growth rate and the derivative; elementary functions, optimization and approximation methods, and their applications; mathematical models of biological processes. Prerequisite: Pre-Calculus 12 (or equivalent) with a grade of at least B, or MATH 100 with a grade of at least C, or achieving a satisfactory grade on the ¶¡ÏãÔ°AV Calculus Readiness Test. Students with credit for either MATH 150, 151 or 157 may not take MATH 154 for further credit. Quantitative.

Riemann sum, Fundamental Theorem of Calculus, definite, indefinite and improper integrals, approximate integration, integration techniques, applications of integration. First-order separable differential equations and growth models. Sequences and series, series tests, power series, convergence and applications of power series. Prerequisite: MATH 150 or 151; or MATH 154 or 157 with a grade of at least B. Students with credit for MATH 155 or 158 may not take this course for further credit. Quantitative.

Designed for students specializing in the biological and medical sciences. Topics include: the integral, partial derivatives, differential equations, linear systems, and their applications; mathematical models of biological processes. Prerequisite: MATH 150, 151 or 154; or MATH 157 with a grade of at least B. Students with credit for MATH 152 or 158 may not take this course for further credit. Quantitative.

Force and motion, conservation of energy and momentum, fluids, properties of soft matter and thermal physics with applications taken from the life sciences. Prerequisite: BC Principles of Physics 12 or PHYS 100 or equivalent, with a minimum grade of C-. This prerequisite may be waived, at the discretion of the department, as determined by the student's performance on a regularly scheduled PHYS 100 final exam. Please consult the physics advisor for further details. Corequisite: MATH 150 or 151 or 154 or 157; BISC 100 or 101 or 102. Students with credit for PHYS 120, 125 or 140 may not take this course for further credit. Quantitative/Breadth-Science.

A general calculus-based introduction to mechanics. Topics include translational and rotational motion, momentum, energy, gravitation, and selected topics in modern physics. Prerequisite: BC Principles of Physics 12 or PHYS 100 or equivalent, with a minimum grade of C-. This prerequisite may be waived, at the discretion of the department, as determined by the student's performance on a regularly scheduled PHYS 100 final exam. Please consult the physics advisor for further details. Corequisite: MATH 150 or 151 or 154 must precede or be taken concurrently. Students with credit for PHYS 101, 125 or 140 may not take this course for further credit. Quantitative/Breadth-Science.

An enriched course in mechanics for students with good preparation in physics and mathematics. Special relativity and classical topics such as translational and rotational dynamics and conservation laws will be given a much more sophisticated treatment than in our other first-year courses. Prerequisite: Permission of the department. Co-requisite: MATH 125. Students with credit for PHYS 101, 120 or PHYS 140 may not take PHYS 125 for further credit. Quantitative.

A general calculus-based introduction to mechanics taught in an integrated lecture-laboratory environment. Topics include translational and rotational motion, momentum, energy, gravitation, and selected topics in modern physics. Prerequisite: BC Principles of Physics 12, or PHYS 100 or equivalent, with a minimum grade of C-. Corequisite: MATH 150 or 151 or 154 must precede or be taken concurrently. Students with credit for PHYS 125 or 120 or 101 may not take this course for further credit. Quantitative/Breadth-Science.

Waves and optics; electricity and magnetism; modern physics emphasizing radioactivity, with applications taken from the life sciences. Prerequisite: PHYS 101 or 120 or 125 or 140, with a minimum grade of C-. Co-requisite: BISC 100 or 101 or 102. Recommended Corequisites: MATH 152, 155 or 158, PHYS 130. Students with credit for PHYS 121, 126, or 141 may not take this course for further credit. Quantitative/Breadth-Science.

A general calculus-based introduction to electricity, magnetism and optics. Topics include electricity, magnetism, simple circuits, optics and topics from applied physics. Prerequisite: PHYS 120 or 125 or 140 (or PHYS 101 with a grade of A or B). Corequisite: MATH 152 or 155 must precede or be taken concurrently. Students with credit for PHYS 102, 126 or 141 may not take this course for further credit. Quantitative/Breadth-Science.

An enriched course in electromagnetism for students with good preparation in physics and mathematics. Classical topics such as waves, electricity and magnetism, as well as wave particle duality and the birth of Quantum Mechanics, will be given a much more sophisticated treatment than in our other first year courses. Prerequisite: PHYS 125 and permission of the department. Co-requisite: MATH 126. Students with credit in PHYS 102, 121 or 141 may not take this course for further credit. Quantitative.

A general calculus-based introduction to electricity, magnetism and optics taught in an integrated lecture-laboratory environment. Topics include electricity, magnetism, simple circuits, optics and topics from applied physics. Prerequisite: PHYS 120 or PHYS 125 or PHYS 140, with a minimum grade of C- (or PHYS 101 with a minimum grade of B). Corequisite: MATH 152 or 155 must precede or be taken concurrently. Students with credit for PHYS 126 or 121 or 102 may not take this course for further credit. Quantitative/Breadth-Science.

Research methodology and associated statistical analysis techniques for students with training in the life sciences. Intended to be particularly accessible to students who are not specializing in Statistics. Prerequisite: 30 units. Students with credit for any of STAT 101, 203 or 270 may not take STAT 201 for further credit,. Quantitative.

Basic laws of probability, sample distributions. Introduction to statistical inference and applications. Corequisite: MATH 152 or 155 or 158. Students wishing an intuitive appreciation of a broad range of statistical strategies may wish to take STAT 100 first. Quantitative.

Modern molecular biological and recombinant nucleic acid method will be covered. Examples are DNA and RNA isolation, plasmid preparation, restriction enzyme digestion, DNA cloning and polymerase chain reaction. Prerequisite: MBB 231, and MBB 331 as a co- or pre-requisite (the latter is recommended), with a minimum grade of C. Students with credit for BISC 357 may not take this course for further credit.

Contemporary techniques in biochemistry including protein purification, immunochemical methods, and lipid characterization. Prerequisite: MBB 231, with a minimum grade of C. Recommended: CHEM 215 and CHEM 286 precede MBB 309W. Writing.

The enzymes and intermediates of major catabolic and anabolic pathways. Their regulation and integration in health and disease states. Prerequisite: MBB 231, with a minimum grade of C.

Biochemical and molecular aspects of cellular function, interactions and communication including cell cycle, apoptosis, cancer, immune system, neuronal transmission and the signal transduction pathways that integrate them. Prerequisite: MBB 231, with a minimum grade of C.

The study of DNA and RNA in relation to gene structure and expression: DNA replication and the regulation of gene expression in bacteria and higher organisms. Introduction to recombinant DNA and cloning theory; natural vector structures and recombinant vector construction. Prerequisite: MBB 231, and BISC 202, with a minimum grade of C.

Introduction to physical biochemistry including thermodynamics, spectroscopic principles and applications, and molecular transport and interactions. The physical properties and structure determination of biomolecules will be emphasized. Prerequisite: MATH 152 (or 155), PHYS 121 (or 102, or 126, or 141), CHEM 122 (or 102), MBB 222 with a minimum grade of C.

An exploration of the fundamental aspects of proteins; their chemical and physical nature, their synthesis, stability and turnover, as well as their structure and function. Methods of protein analysis and structure determination will be presented. Prerequisite: MBB 222,with a minimum grade of C.

Major topics in genomics and bioinformatics, with integrated discussion of associated ethical/legal/social issues. An overview of laboratory and computer-based methods to study genomes, and their applications. Hands-on computer lab session providing an opportunity to use and experiment with bioinformatics software and database utilized in genomics and bioinformatics research. Prerequisite: MBB 231, BISC 202 and 3 units of CMPT or equivalent, with a minimum grade of C.

Aspects of developmental biology in the context of signal transduction pathways. The diverse mechanisms used in sell signalling and how the various approaches to the study of signal transduction in organismal development complement each other will be examined with an emphasis on current literature. Prerequisite: MBB 331 with a minimum grade of C.

The topics in this course will vary from term to term, depending on faculty availability and student interest. Prerequisite: Will be announced before the start of the term and will depend upon the nature of the topic offered.

Recent literature is examined for insights into the structure and properties of DNA and RNA, drawing on a variety of biochemical, chemical and molecular biological perspectives. Prerequisite: MBB 331 with a minimum grade of C.

A review of recent research on the structure, dynamics, function and biosynthesis of membranes, membrane lipids and proteins. Prerequisite: MBB 322 and MBB 309W with a minimum grade of C, MBB 324 as a pre or co-requisite.

Mechanistic principles for how protein molecules achieve diverse functions such as chemical catalysis and conformational switching. Students will learn to critique hypotheses about structural mechanisms, and to interpret the primary literature reporting on structural evidence from X-ray diffraction and spectroscopy. Prerequisite: MBB 323 or MBB 324.

Structure and function of molecules that mediate transport across membranes including channels, carriers, and pumps. Primary literature from the fields of biochemistry and physiology will be explored through lectures and independent study. Prerequisite: MBB 321, 322 and either MBB 323 or CHEM 360, with a minimum grade of C. Students who have taken MBB 420 under the same topic may not take this course for further credit.

The basic organization of the immune system, including structure, function and genetics of antibodies, T-cell receptors, innate immune receptors, and the complement system. Innate, antibody and cellular immune responses and their control, and development of the cells involved in these responses. Prerequisite: MBB 331 with a minimum grade of C. Students who have taken HSCI 325 or HSCI 425 cannot take MBB 426 for further credit.

The immunologic response to bacterial, viral and parasitic infections, immunological diseases, such as autoimmune diseases, immunodeficiency, hypersensitivity reactions (including asthma and allergy) and transplantation-rejection reactions. Immunotherapeutics and vaccine development. Prerequisite: MBB 426 or HSCI 426, with a minimum grade of C. Students with credit for HSCI 427 may not repeat this course for further credit.

The molecular strategies that bacterial, viral and fungal pathogens use to colonize the human body and cause disease will be studied. Using specific organisms as illustrations, emphasis will be placed on the structural biology of molecular systems such as acquisition and use of virulence factors, adhesion to and invasion of host cells, secretion of toxins and immune escape. Prions, zoonoses and emerging diseases will be included. Prerequisite: MBB 322 with a minimum grade of C. Students who have taken MBB 420 under the same title cannot take this course for further credit.

Analysis of mechanisms of protein, lipid, and nucleic acid delivery and transport within cells; processes of protein targeting, exocytosis, and endocytosis; molecular mechanisms of vesicle transport and membrane fusion; role in signal transduction and disease. Prerequisite: MBB 322 and MBB 331, with a minimum grade of C.

The cellular basis of selected chronic diseases such as cancer and polycystic kidney disease will be explored in-depth. Through the use of lectures and group discussions and an emphasis on the primary literature, the focus will be on recent developments in the study of these diseases. Prerequisite: MBB 322 and 331, with a minimum grade of C. Students who have taken MBB 440 under the same title cannot take this course for further credit.

Laboratory with accompanying lectures designed to give practical experience in advanced contemporary molecular biology techniques. Lab exercises will include site-directed mutagenesis, preparation and characterization of GST-fusion proteins, construction of transgenes and their expression in transgenic organisms, and use of the yeast two-hybrid assay to study protein-protein interactions. Prerequisite: MBB 308 and 331, with a minimum grade of C, or permission of instructor.

The analysis of entire genomes of organisms has only been possible since 1995. This new area of study will be examined in detail with emphasis on current research. Prerequisite: MBB 331 with a minimum grade of C.

Lectures and student presentations will cover the wide range of ways in which organisms (primarily eukaryotes) regulate gene expression along the pathway from DNA to protein. Prerequisite: MBB 331, with a minimum grade of C.

An investigation of how biochemistry, cell biology and genetics is used to study the diverse mechanisms used in cell signaling along with an exploration of how the various approaches to studying signal transduction complement each other. Prerequisite: MBB 321, 322, and MBB 331, with a minimum grade of C.

Recent advances in human molecular genetics including genome analysis, gene therapy, genetic testing, and studies of genetic disorders. Prerequisite: MBB 331, with a minimum grade of C.

The topics in this course will vary from term to term, depending on faculty availability and student interest. Prerequisite: will depend upon the nature of the topic offered.

Lectures and hands-on instruction at the computer in the use of, and theory behind, bioinformatic software and algorithms for the analysis of macromolecular data. Prerequisite: MBB 331 and MBB 342.

Proteomics concerns the analysis of the entire complement of proteins expressed by an organism. This course will consider protein sequence alignment, sequence database scanning, classification of protein structures, prediction of protein structure and function, and evolution of protein function. Prerequisite: MBB 321, MBB 322 and MBB 342.

A consideration of protein biogenesis (folding, assembly, and targeting to cellular compartments), modification, and degradation, and their roles in protein and cellular function. Prerequisite: MBB 321 and MBB 322, with a minimum grade of C.

Examination of recent literature on neuronal growth cones and axonal guidance. Cell cultural, biochemical, and molecular genetic approaches will be emphasized in assessing guidance cues. Prerequisite: MBB 331, with a minimum grade of C.

An examination of various types of cell death and cell survival mechanisms and their relationship to disease with a focus on cancer and therapeutic strategies. Prerequisite: MBB 322 and 331, with a minimum grade of C, or permission of the instructor. Students who took MBB 440 with the same title may not take MBB 446 for credit.

Examination of the fundamentals of comparative genomics, identification and activity of functional elements in genomes, inter- and intra-species comparisons, relationship of genomic to phenotypic variation, and personalized genomics are among the topics to be explored. Comparison of genome data has impacts on medicine and many other fields of the life sciences. Prerequisite: MBB 331 and MBB 342. Students who have completed MBB 440 Comparative Genomics may not complete this course for further credit.

The organization of the human genome and the role of genomic variation in health and disease. Genomics and personalized medicine; intellectual property and privacy issues. Prerequisite: MBB 331 and MBB 342. Students with credit for MBB 440 with this same course title may not complete this course for further credit.

Experiments in biological and soft condensed matter physics including investigation of Brownian motion, molecular order and biophysical forces using techniques such as optical trapping, NMR, spectroscopy and x-ray diffraction. Attention will also be given to more general skills, including experimental design, operating and troubleshooting experimental equipment, data analysis, and the presentation of experimental results. Prerequisite: PHYS 231 or MBB 309; PHYS 344 or PHYS 347 or MBB 323 or CHEM 360, with a minimum grade of C- or permission of the department. Quantitative.

Part 1 of 3-part honors degree program, the individual study semester (ISS). The ISS provides students with the opportunity to carry out full time laboratory research in molecular biology and biochemistry. The grade for MBB 481 encompasses the research design aspect of the ISS, consisting of a written proposal and final report. Prerequisite: Enrolment in the MBB or Biological Physics Honors Program, a minimum 3.0 CGPA and 3.0 UDGPA and permission of the MBB department. Corequisite: MBB 482 and MBB 483. Students may not receive credit for both MBB 481 and MBB 493.

Part 2 of a 3-part honors degree program, the individual study semester (ISS). The ISS provides students with the opportunity to carry out full time laboratory research in molecular biology and biochemistry. The grade for MBB 482 encompasses the research performance component of the ISS. Prerequisite: Enrolment in the MBB or Biological Physics Honors Program, a minimum 3.0 CGPA and 3.0 UDGPA and permission of the MBB department. Corequisite: MBB 481 and MBB 483. Students may not receive credit for both MBB 482 and MBB 493.

Part 3 of a 3-part honors degree program, the individual study semester (ISS). The ISS provides students with the opportunity to carry out full time laboratory research in molecular biology and biochemistry. The grade for MBB 483 encompasses the research reporting component of the ISS. Prerequisite: Enrolment in the MBB or Biological Physics Honors Program, a minimum 3.0 CGPA and 3.0 UDGPA and permission of the MBB department. Corequisite: MBB 481 and MBB 482. Students may not receive credit for both MBB 483 and MBB 493.

Part time laboratory research in an area of molecular biology or biochemistry for preparation of a thesis in molecular biology and biochemistry. Before seeking approval for enrolment in this course, the student should already have obtained the agreement of a ¶¡ÏãÔ°AV faculty member that he/she is willing to supervise the project, and have prepared a written proposal (of approximately 1-2 pages) stating the nature of the research project. The course will include the preparation of a written research report on the results of the project, and may also, at the discretion of the supervisor, include an oral presentation of the results. Prerequisite: MBB 231, with a minimum grade of C, and permission of the molecular biology and biochemistry department. Usually, upper level standing with at least 60 units in a molecular biology and biochemistry major, minor or honors program will be required.

Full time laboratory research in an area of molecular biology or biochemistry for preparation of a thesis for the honors degree in molecular biology and biochemistry. This course is available to honors students who have already taken MBB 491, or who plan to break an individual studies project into two terms (see below). The course will include the preparation of a comprehensive written research report on the results of the project, and may also, at the discretion of the supervisor, include an oral presentation of the results. Prerequisite: Permission of the department.