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間眅埶AV Calendar | Spring 2014
Molecular Biology and Biochemistry and Computing Science Joint Honours
The School of Computing Science and the Department of Molecular Biology and Biochemistry offer this bachelor of science (BSc) joint honours program. The student enrolment, appeals, and graduation processing are administered by the School of Computing Science in the Faculty of Applied Sciences.
間眅埶AV Requirements
To enter, students must meet the honours program admission requirements as specified by both departments.
Cumulative Grade Point Average Requirements
Students are required to achieve a minimum cumulative grade point average (CGPA) of 3.0, and an upper division grade point average of 3.0.
Prerequisite Grade Requirement
Computing science course entry requires a grade of C- or better in each prerequisite course. A minimum 2.40 CGPA is required for 200, 300 and 400 division computing courses.
Lower Division Requirements
Students complete a total of 63-70 units, including either
A rigorous introduction to computing science and computer programming, suitable for students who already have substantial programming background. This course provides a condensed version of the two-course sequence of CMPT 120/125, with the primary focus on computing science and object oriented programming. Topics include: fundamental algorithms and problem solving; abstract data types and elementary data structures; basic object-oriented programming and software design; elements of empirical and theoretical algorithmics; computation and computability; specification and program correctness; and history of computing science. Prerequisite: BC Math 12 (or equivalent, or any of MATH 100, 150, 151, 154, or 157). Students with credit for CMPT 120, 125, 128, 130, 135 or higher may not take CMPT 126 for further credit. Quantitative/Breadth-Science.
or both of
An elementary introduction to computing science and computer programming, suitable for students with little or no programming background. Students will learn fundamental concepts and terminology of computing science, acquire elementary skills for programming in a high-level language and be exposed to diverse fields within, and applications of computing science. Topics will include: pseudocode, data types and control structures, fundamental algorithms, computability and complexity, computer architecture, and history of computing science. Treatment is informal and programming is presented as a problem-solving tool. Students should consult with the self-evaluation on the School of Computing Science website to decide whether they should follow the CMPT 120/125 course sequence or enrol in CMPT 126. Prerequisite: BC Math 12 or equivalent is recommended. Students with credit for CMPT 102, 125, 126, 128 or CMPT 200 or higher may not take this course for further credit. Quantitative/Breadth-Science.
A rigorous introduction to computing science and computer programming, suitable for students who already have some backgrounds in computing science and programming. Intended for students who will major in computing science or a related program. Topics include: fundamental algorithms; elements of empirical and theoretical algorithmics; abstract data types and elementary data structures; basic object-oriented programming and software design; computation and computability; specification and program correctness; and history of computing science. Prerequisite: BC Math 12 (or equivalent, or any of MATH 100, 150, 151, 154, or 157) and CMPT 120. Students with credit for CMPT 126, 128, 135 or CMPT 200 or higher may not take for further credit. Quantitative.
and one of
Polyfunctional organic compounds and complex organic reactions. Introduction to natural products. Students with credit for CHEM 283 may not complete this course for further credit. Prerequisite: CHEM 281. Quantitative.
An advanced treatment of Organic Chemistry II. Topics include dienes and their reactivity, conjugation and aromaticity, aromatic substitution reactions, carboxylic acids and their derivatives, ketones and aldehydes, biological molecules, radical reactions, organometallic reagents, pericyclic reactions and planning multi-step synthesis. Prerequisite: CHEM 281. Students should not receive credit for both CHEM 282 and 283. Students should not receive credit for both CHEM 282 and 283. Quantitative.
and one of
Designed for students specializing in mathematics, physics, chemistry, computing science and engineering. Topics as for Math 151 with a more extensive review of functions, their properties and their graphs. Recommended for students with no previous knowledge of Calculus. In addition to regularly scheduled lectures, students enrolled in this course are encouraged to come for assistance to the Calculus Workshop (Burnaby), or Math Open Lab (Surrey). Prerequisite: Pre-Calculus 12 (or equivalent) with a grade of at least B+, or MATH 100 with a grade of at least B-, or achieving a satisfactory grade on the 間眅埶AV Calculus Readiness Test. Students with credit for either MATH 151, 154 or 157 may not take MATH 150 for further credit. Quantitative.
Designed for students specializing in mathematics, physics, chemistry, computing science and engineering. Logarithmic and exponential functions, trigonometric functions, inverse functions. Limits, continuity, and derivatives. Techniques of differentiation, including logarithmic and implicit differentiation. The Mean Value Theorem. Applications of Differentiation including extrema, curve sketching, related rates, Newton's method. Antiderivatives and applications. Conic sections, polar coordinates, parametric curves. Prerequisite: Pre-Calculus 12 (or equivalent) with a grade of at least A, or MATH 100 with a grade of at least B, or achieving a satisfactory grade on the 間眅埶AV Calculus Readiness Test. Students with credit for either MATH 150, 154 or 157 may not take MATH 151 for further credit. Quantitative.
and all of
An introduction to the biochemical and physiological mechanisms of living organisms. Topics covered include cell structure and function, DNA replication and the flow of genetic information, enzyme function, metabolism and physiology of microorganisms, plants, and animals. Prerequisite: High school biology 12 (or equivalent) with a C grade or better, or BISC 100 with C- or better, or HSCI 100 with C+ or better. Breadth-Science.
Survey of the diversity of life, and its evolutionary history on earth. The student is introduced to the study of genetics, development, and evolution, giving an overview of how these processes interact to produce form and function. Also included are principles of behavior and ecological relationships of organisms to each other and their environment. Prerequisite: High school biology 12 (or equivalent) with a C grade or better, or BISC 100 with C- or better, or HSCI 100 with C+ or better. Breadth-Science.
Principles and concepts of the transmission of genetic information treated comparatively in man, animal, plant and microbe. Prerequisite: BISC 101 and 102 with a grade of C- or better.
Atomic and molecular structure; chemical bonding; thermochemistry; elements; periodic table; gases liquids, solids, and solutions. This course includes a laboratory component. Prerequisite: BC high school chemistry 12 or CHEM 111. Recommended: MATH 151 (or 154) and PHYS 120 (or 101) as a corequisite. Students may not count both CHEM 120 and 121 for credit. Quantitative/Breadth-Science.
Chemical equilibria; electrochemistry; chemical thermodynamics; kinetics. Students who intend to take further laboratory courses in chemistry should take CHEM 122 concurrently with CHEM 126. Prerequisite: CHEM 121 or 120. Recommended: MATH 152 (or 155) and PHYS 121 (or 102) as a corequisite. Quantitative.
Structure, bonding, physical and chemical properties of simple organic compounds. Introduction to spectroscopy. Kinetics and mechanisms of organic reactions. This course includes a laboratory component. Prerequisite: CHEM 121. Corequisite: CHEM 122. Quantitative.
Digital design concepts are presented in such a way that students will learn how basic logic blocks of a simple computer are designed. Topics covered include: basic Von Neumann computer architecture; an introduction to assembly language programming; combinational logic design; and sequential logic design. Prerequisite: Strongly recommended: MACM 101 and either CMPT 120 or equivalent programming. Students with credit for ENSC 150 or CMPT 290 may not take this course for further credit. Quantitative.
Introduction to a variety of practical and important data structures and methods for implementation and for experimental and analytical evaluation. Topics include: stacks, queues and lists; search trees; hash tables and algorithms; efficient sorting; object-oriented programming; time and space efficiency analysis; and experimental evaluation. Prerequisite: MACM 101 and one of CMPT 125, 126 or 128; or CMPT 128 and approval as a Biomedical Engineering Major. Students with credit for CMPT 201 may not take this course for further credit. Quantitative.
Introduction to software engineering techniques used in analysis/design and in software project management. The course centres on a team project involving requirements gathering, object analysis and simple data normalization, use-case-driven user documentation and design followed by implementation and testing. Additionally, there is an introduction to project planning, metrics, quality assurance, configuration management, and people issues. Prerequisite: CMPT 225, MACM 101, MATH 151 (or MATH 150), one W course. MATH 154 or 157 with a grade of at least B+ may be substituted for MATH 151 (or MATH 150). Students with credit for CMPT 276 may not take this course for further credit.
Introduction to counting, induction, automata theory, formal reasoning, modular arithmetic. Prerequisite: BC Math 12 (or equivalent), or any of MATH 100, 150, 151, 154, 157. Quantitative/Breadth-Science.
A continuation of MACM 101. Topics covered include graph theory, trees, inclusion-exclusion, generating functions, recurrence relations, and optimization and matching. Prerequisite: MACM 101. Quantitative.
Riemann sum, Fundamental Theorem of Calculus, definite, indefinite and improper integrals, approximate integration, integration techniques, applications of integration. First-order separable differential equations. Sequences and series, series tests, power series, convergence and applications of power series. Prerequisite: MATH 150 or 151; or MATH 154 or 157 with a grade of at least B. Students with credit for MATH 155 or 158 may not take this course for further credit. Quantitative.
The structure, function and synthesis of proteins, RNA and DNA and their interrelated biological functions within the cell. An introduction to molecular biology techniques and methods of protein purification and analysis. Prerequisite: or Corequisite CHEM 281.
A study of the molecular processes which underlie cell structure and function, integrating ultrastructural, physiological and biochemical approaches. Modern techniques used in the analysis of organelle and cell function are integral parts of the course. Prerequisite: MBB 222, BISC 101, CHEM 281 with grades of C- or better. Corequisite: or Prerequisite: Chem 282 or Chem 283.
Basic laws of probability, sample distributions. Introduction to statistical inference and applications. Corequisite: MATH 152 or 155 or 158. Students wishing an intuitive appreciation of a broad range of statistical strategies may wish to take STAT 100 first. Quantitative. Prerequisite: COREQ-MATH 152 or 155 or 158. Students wishing an intuitive appreciation of a broad range of statistical strategies may wish to take STAT 100 first. Equivalent Courses: STAT102 STAT103 STAT201 STAT203 STAT301. Quantitative.
and one of
Force and motion, conservation of energy and momentum, fluids, properties of soft matter and thermal physics with applications taken from the life sciences. Prerequisite: BC Principles of Physics 12 or PHYS 100 or equivalent. This prerequisite may be waived, at the discretion of the department, as determined by the student's performance on a regularly scheduled PHYS 100 final exam. Please consult the physics advisor for further details. Corequisite: MATH 150 or 151 or 154 or 157; BISC 100 or 101 or 102. Students with credit for PHYS 120, 125 or 140 may not take this course for further credit. Quantitative/Breadth-Science.
A general calculus-based introduction to mechanics. Topics include translational and rotational motion, momentum, energy, gravitation, and selected topics in modern physics. Prerequisite: BC Principles of Physics 12 or PHYS 100 or equivalent. This prerequisite may be waived, at the discretion of the department, as determined by the student's performance on a regularly scheduled PHYS 100 final exam. Please consult the physics advisor for further details. Corequisite: MATH 150 or 151 or 154 must precede or be taken concurrently. Students with credit for PHYS 101, 125 or 140 may not take this course for further credit. Quantitative/Breadth-Science.
Newtonian mechanics and special relativity for students with good preparation in physics and mathematics. Topics include Newtonian particle mechanics, angular momentum, torque, conservation laws, gravitation, and special relativity. Prerequisite: Greater than 85% in both BC Pre-Calculus 12 & BC Physics 12, or a grade of A in PHYS 100, or equivalent. Co-requisite: MATH 150 or 151 or 154 must precede or be taken concurrently. Students with credit for PHYS 101, 120 or PHYS 140 may not take PHYS 125 for further credit. Quantitative.
A general calculus-based introduction to mechanics taught in an integrated lecture-laboratory environment. Topics include translational and rotational motion, momentum, energy, gravitation, and selected topics in modern physics. Prerequisite: BC Principles of Physics 12, or equivalent. Corequisite: MATH 150 or 151 or 154 must precede or be taken concurrently. Students with credit for PHYS 125 or 120 or 101 may not take this course for further credit. Quantitative/Breadth-Science.
and one of
Waves and optics; electricity and magnetism; modern physics emphasizing radioactivity, with applications taken from the life sciences. Prerequisite: PHYS 101 or 120 or 125 or 140. Recommended corequisite: MATH 152 or 155 or 158. Students are encouraged to take PHYS 130 at the same time as PHYS 102. Students with credit for PHYS 121, 126, or 141 may not take this course for further credit. Quantitative/Breadth-Science.
A general calculus-based introduction to electricity, magnetism and optics. Topics include electricity, magnetism, simple circuits, optics and topics from applied physics. Prerequisite: PHYS 120 or 125 or 140 (or PHYS 101 with a grade of A or B). Corequisite: MATH 152 or 155 must precede or be taken concurrently. Students with credit for PHYS 102, 126 or 141 may not take this course for further credit. Quantitative/Breadth-Science.
Electricity, magnetism, and the electromagnetic character of light for students with good preparation in physics and mathematics. Topics include waves, simple electrical circuits, electricity, magnetism, the unifications of electromagnetism in relativity, light as an electromagnetic wave, and photons. Prerequisite: PHYS 125 or a grade of A or better in PHYS 120 or 140. Corequisite: MATH 152 or 155 must precede or be taken concurrently. Students with credit in PHYS 102, 121 or 141 may not take this course for further credit. Quantitative.
A general calculus-based introduction to electricity, magnetism and optics taught in an integrated lecture-laboratory environment. Topics include electricity, magnetism, simple circuits, optics and topics from applied physics. Prerequisite: PHYS 140. Corequisite: MATH 152 or 155 must precede or be taken concurrently. Students with credit for PHYS 126 or 121 or 102 may not take this course for further credit. Quantitative/Breadth-Science.
Upper Division Requirements
Students complete a total of 56-58 units, including all of
Analysis and design of data structures for lists, sets, trees, dictionaries, and priority queues. A selection of topics chosen from sorting, memory management, graphs and graph algorithms. Prerequisite: CMPT 225, MACM 201, MATH 151 (or MATH 150), and MATH 232 or 240.
An examination of social processes that are being automated and implications for good and evil, that may be entailed in the automation of procedures by which goods and services are allocated. Examination of what are dehumanizing and humanizing parts of systems and how systems can be designed to have a humanizing effect. Prerequisite: A CMPT course and 45 units. Breadth-Science.
Logical representations of data records. Data models. Studies of some popular file and database systems. Document retrieval. Other related issues such as database administration, data dictionary and security. Prerequisite: CMPT 225, MACM 101.
This course introduces students to the computing science principles underlying computational biology. The emphasis is on the design, analysis and implementation of computational techniques. Possible topics include algorithms for sequence alignment, database searching, gene finding, phylogeny and structure analysis. Prerequisite: CMPT 307. Students with credit for CMPT 341 may not take this course for further credit.
Modern molecular biological and recombinant DNA methods such as DNA isolation, plasmid preparation, restriction enzyme digestion, Southern blots, cloning and polymerase chain reaction. Prerequisite: MBB 231, and MBB 331 as a co- or pre-requisite (the latter is recommended), with a minimum grade of C. Students with credit for BISC 357 may not take this course for further credit.
The study of DNA and RNA in relation to gene structure and expression: DNA replication and the regulation of gene expression in bacteria and higher organisms. Introduction to recombinant DNA and cloning theory; natural vector structures and recombinant vector construction. Prerequisite: MBB 231, and BISC 202, with a minimum grade of C.
Lectures and hands-on instruction at the computer in the use of, and theory behind, bioinformatic software and algorithms for the analysis of macromolecular data. Prerequisite: MBB 331 and an introductory computer science course (e.g. CMPT 110 or 120), or equivalent, with a minimum grade of C.
Directed reading and part-time scientific research in an area of molecular biology or biochemistry. This course is intended only for those students taking a joint MBB/BUS or MBB/CS honors degree. Before seeking approval for enrolment in this course, the student should already have obtained the agreement of a faculty member that he/she is willing to supervise the project, and have prepared a written proposal (of approximately 1-2 pages) stating the nature of the research readings and project. The course will include preparation of a written report on the results of the project, and may, at the discretion of the supervisor, include an oral presentation of the results. Prerequisite: 75 units and upper division standing in an MBB joint honors program, and MBB 308 with a minimum grade of C. Students who take MBB 496 are not allowed to take MBB 491, 492 or 493 with the same faculty supervisor.
The standard techniques of multiple regression analysis, analysis of variance, and analysis of covariance, and their role in experimental research. Prerequisite: Any STAT course (except STAT 100), or BUEC 232, or ARCH 376. Statistics major and honors students may not use this course to satisfy the required number of elective units of upper division statistics. However, they may include the course to satisfy the total number of required units of upper division credit. Students cannot obtain credit for STAT 302 if they already have credit for STAT 305 and/or 350. Quantitative.
and one of
Covers professional writing in computing science, including format conventions and technical reports. Examines group dynamics, including team leadership, dispute resolution and collaborative writing. Also covers research methods. Prerequisite: Any lower-division W course. Co-requisite: CMPT 275. Students with credit for CMPT 376 may not take this course for further credit. Writing.
Contemporary techniques in biochemistry including protein purification, immunochemical methods, and lipid characterization. Prerequisite: MBB 231, with a minimum grade of C. Recommended: CHEM 215 and CHEM 286 precede MBB 309W. Writing.
and at least two of
This course is an introduction to the modelling, analysis, and computer simulation of complex systems. Topics include analytic modelling, discrete event simulation, experimental design, random number generation, and statistical analysis. Prerequisite: CMPT 225, MACM 101, STAT 270.
Provides a unified discussion of the fundamental approaches to the problems in artificial intelligence. The topics considered are: representational typology and search methods; game playing, heuristic programming; pattern recognition and classification; theorem-proving; question-answering systems; natural language understanding; computer vision. Prerequisite: CMPT 225 and MACM 101. Students with credit for CMPT 410 may not take this course for further credit.
The principles involved in using computers for data acquisition, real-time processing, pattern recognition and experimental control in biology and medicine will be developed. The use of large data bases and simulation will be explored. Prerequisite: Completion of 60 units including CMPT 125, 126 or 128 (or 102 with a grade of B or higher).
This course provides an introduction to the fundamentals of computer graphics. Topics include graphics display and interaction hardware, basic algorithms for 2D primitives, anti-aliasing, 2D and 3D geometrical transformations, 3D projections/viewing, Polygonal and hierarchical models, hidden-surface removal, basic rendering techniques (color, shading, raytracing, radiosity), and interaction techniques. Prerequisite: CMPT 225 and MATH 232 or 240.
A presentation of the problems commonly arising in numerical analysis and scientific computing and the basic methods for their solutions. Prerequisite: MATH 152 or 155 or 158, and MATH 232 or 240, and computing experience. Quantitative.
The enzymes and intermediates of major catabolic and anabolic pathways. Their regulation and integration in health and disease states. Prerequisite: MBB 231, with a minimum grade of C.
and at least three of
Models of computation, methods of algorithm design; complexity of algorithms; algorithms on graphs, NP-completeness, approximation algorithms, selected topics. Prerequisite: CMPT 307.
This course examines the theoretical and applied problems of constructing and modelling systems, which aim to extract and represent the meaning of natural language sentences or of whole discourses, but drawing on contributions from the fields of linguistics, cognitive psychology, artificial intelligence and computing science. Prerequisite: Completion of nine units in Computing Science upper division courses or, in exceptional cases, permission of the instructor.
Current topics in artificial intelligence depending on faculty and student interest.
An advanced course on database systems which covers crash recovery, concurrency control, transaction processing, distributed database systems as the core material and a set of selected topics based on the new developments and research interests, such as object-oriented data models and systems, extended relational systems, deductive database systems, and security and integrity. Prerequisite: CMPT 300 and 354.
Recent research in transition state theory; specificity in enzyme catalyzed reactions, the use of recombinant DNA techniques to describe and modify enzyme catalysis, the function of enzymes in organic solvents, and the development of new catalytic activities through monoclonal antibody techniques. Prerequisite: two of MBB 321, 322, 323, 331, with a minimum grade of C.
The analysis of entire genomes of organisms has only been possible since 1995. This new area of study will be examined in detail with emphasis on current research. Prerequisite: MBB 331 with a minimum grade of C.
Recent advances in human molecular genetics including genome analysis, gene therapy, genetic testing, and studies of genetic disorders. Prerequisite: MBB 331, with a minimum grade of C.
Proteomics concerns the analysis of the entire complement of proteins expressed by an organism. This course will consider protein sequence alignment, sequence database scanning, classification of protein structures, prediction of protein structure and function, and evolution of protein function. Prerequisite: MBB 321 and MBB 322; one introductory computer course (e.g. CMPT 110 or 120), or equivalent, with a minimum grade of C.
and six additional 400 division computing science units
and six research related MBB units which are fulfilled by completing MBB 496-6
Elective Courses
In addition to the courses listed above, students should consult an academic advisor to plan the remaining required elective courses.
Faculty of Science Honours Requirements
In addition to the above requirements, students must also satisfy Faculty of Science honours program requirements as follows.
- students are required to complete additional upper division units to total a minimum of 60 upper division units (excluding EDUC 401 to 406)
- students who were enrolled at 間眅埶AV between fall 1991 and summer 2006 are required to complete a minimum of 12 units in subjects outside the Faculty of Science (excluding EDUC 401 to 406) including six units minimum to be completed in the Faculty of Arts and Social Sciences
Writing, Quantitative, and Breadth Requirements
Students admitted to 間眅埶AV beginning in the fall 2006 term must meet writing, quantitative and breadth requirements as part of any degree program they may undertake. See for university-wide information.
WQB Graduation Requirements
A grade of C- or better is required to earn W, Q or B credit
Requirement |
Units |
Notes | |
W - Writing |
6 |
Must include at least one upper division course, taken at 間眅埶AV within the student’s major subject | |
Q - Quantitative |
6 |
Q courses may be lower or upper division | |
B - Breadth |
18 |
Designated Breadth | Must be outside the student’s major subject, and may be lower or upper division 6 units Social Sciences: B-Soc 6 units Humanities: B-Hum 6 units Sciences: B-Sci |
6 |
Additional Breadth | 6 units outside the student’s major subject (may or may not be B-designated courses, and will likely help fulfil individual degree program requirements) |
Residency Requirements and Transfer Credit
The University’s residency requirement stipulates that, in most cases, total transfer and course challenge credit may not exceed 60 units, and may not include more than 15 units as upper division work.
- At least half of the program’s total units must be earned through 間眅埶AV study
- At least two thirds of the program’s total upper division units must be earned through 間眅埶AV study
- At least two thirds of the upper division units in the courses of a school offering (or joint offering) a program must be earned through that school at 間眅埶AV
For information regarding transfer consult a Computing Science Advisor.
Co-operative Education and Work Experience
All computing science students are strongly encouraged to explore the opportunities that Work Integrated Learning (WIL) offers. Students should contact a computing science co-op advisor during the first year of study to ensure that they have all of the necessary courses and information to help plan for a successful co-op experience.
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